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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5457102_5457214_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5457102 - 5457214

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CCATTTTGAATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATCCAT

U12 Branch Point Sequence:

TTTTCTCTATCC

Flanking Amino Acid:

TEKCVVNEECSPSSCLVTEW

Intron Amino Acid Position:

550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

85.6

30.4

Major BPS

69.5

0.49

1.2

78.7

34.9

Major PPT

64.1

0.32

61.5

38.7

Minor 5ss

44.2

-0.6

2.9

66.4

38.5

Minor BPS

61.5

0.34

1.9

78.94

36.5

Associated Gene:

Gene:

SPON1

Ensembl Gene ID:

ENSAPLG00000006849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010246

5444213 - 5633863

189651

ENSAPLT00000007124

5451750 - 5633863

182114