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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5457386_5457740_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5457386 - 5457740

Intron Length:

355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCAAG

5'SS Class:

major

3'SS Sequence:

CTCTGTATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TCCTCTGTATTT

Flanking Amino Acid:

PCMGPGCSDEDGSTCMMSDW

Intron Amino Acid Position:

493

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

70.7

41.1

Major BPS

84.4

0.85

34.5

Major PPT

0.58

0.8

73.7

35.6

Minor 5ss

38.8

-1.3

2.8

48.4

47.4

Minor BPS

47.2

-0.1

2.2

66.47

45.5

Associated Gene:

Gene:

SPON1

Ensembl Gene ID:

ENSAPLG00000006849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010246

5444213 - 5633863

189651

ENSAPLT00000007124

5451750 - 5633863

182114