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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54575252_54576121_F

Intron Information:

Intron Rank:

129153

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

54575252 - 54576121

Intron Length:

870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTCTTC

5'SS Class:

weak_major

3'SS Sequence:

CTCTCTGGACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TCTCTCTGGACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

67.7

38.4

Major BPS

73.8

0.59

1.3

72.8

Major PPT

64.1

0.32

1.1

57.8

Minor 5ss

0.54

2.2

76.6

39.1

Minor BPS

0.23

1.5

67.57

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017374

54575063 - 54577699

2637