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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5459003_5459160_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5459003 - 5459160

Intron Length:

158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTTTTTGATT

Flanking Amino Acid:

AGTDSGVTYESPNKPTVPQE

Intron Amino Acid Position:

360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

79.4

28.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.9

0.83

0.8

81.8

34.6

Minor 5ss

38.1

-1.3

3.1

48.5

47.7

Minor BPS

70.3

0.72

1.1

81.54

34.7

Associated Gene:

Gene:

SPON1

Ensembl Gene ID:

ENSAPLG00000006849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010246

5444213 - 5633863

189651

ENSAPLT00000007124

5451750 - 5633863

182114