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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5459363_5477317_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5459363 - 5477317

Intron Length:

17955

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTAAG

5'SS Class:

major

3'SS Sequence:

GTCCAATTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

ATTCAGTTGATA

Flanking Amino Acid:

AQWPAWQPLNVRAAPSAEFS

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.1

70.9

40.9

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

73.1

0.52

0.9

65.6

39.7

Minor 5ss

37.1

-1.5

2.8

43.3

43.8

Minor BPS

46.8

-0.2

2.2

63.03

36.9

Associated Gene:

Gene:

SPON1

Ensembl Gene ID:

ENSAPLG00000006849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010246

5444213 - 5633863

189651

ENSAPLT00000007124

5451750 - 5633863

182114