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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54596557_54604560_F

Intron Information:

Intron Rank:

144632

Intron Class:

major

Intron Phase:

Intron Coordinates:

54596557 - 54604560

Intron Length:

8004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCATCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TATATCTCACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.4

38.2

Major BPS

87.6

0.93

0.9

89.3

Major PPT

87.6

0.85

0.7

85.1

29.2

Minor 5ss

25.6

-2.8

30.5

42.8

Minor BPS

49.2

0.02

1.8

69.74

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022020

54596206 - 54605635

9430