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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54620137_54624978_F

Intron Information:

Intron Rank:

133959

Intron Class:

major

Intron Phase:

Intron Coordinates:

54620137 - 54624978

Intron Length:

4842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

ATCCTTCTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

CTCTCTTTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.15

0.6

96.2

11.9

Major BPS

83.9

0.84

73.9

41.3

Major PPT

79.5

0.66

0.7

77.6

30.5

Minor 5ss

39.3

-1.2

2.8

50.9

45.5

Minor BPS

63.3

0.4

1.6

69.42

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022028

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022142

54619767 - 54702497

82731