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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54688280_54702248_F

Intron Information:

Intron Rank:

133962

Intron Class:

major

Intron Phase:

Intron Coordinates:

54688280 - 54702248

Intron Length:

13969

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTTTG

5'SS Class:

major

3'SS Sequence:

GACTGTCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATTTCATGATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

68.6

39.1

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

74.1

0.54

0.9

69.4

41.4

Minor 5ss

39.6

-1.2

2.9

45.7

43.5

Minor BPS

0.14

76.82

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022028

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023077

54688027 - 54702497

14471