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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54689189_54697791_R

Intron Information:

Intron Rank:

154275

Intron Class:

major

Intron Phase:

Intron Coordinates:

54689189 - 54697791

Intron Length:

8603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTTCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTAAA

U12 Branch Point Sequence:

TTTGCTTCCAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

70.5

40.5

Major BPS

60.1

0.25

1.3

61.7

43.1

Major PPT

70.1

0.45

33.7

Minor 5ss

40.5

-1.1

3.4

50.6

46.1

Minor BPS

46.1

-0.3

2.1

64.41

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018031

54688917 - 54698985

10069