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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54739831_54745996_F

Intron Information:

Intron Rank:

145830

Intron Class:

major

Intron Phase:

Intron Coordinates:

54739831 - 54745996

Intron Length:

6166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTAG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTGCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TTTTTGTTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.6

36.7

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

67.4

0.39

0.9

58.7

38.3

Minor 5ss

36.1

-1.6

3.3

45.9

49.3

Minor BPS

58.3

0.34

2.4

86.99

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047711

54739691 - 54756043

16353