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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5477383_5570444_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5477383 - 5570444

Intron Length:

93062

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

TCTCTTTTCACA

Flanking Amino Acid:

VKMEEEIRQQSDEVLTVIKA

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

73.9

Major BPS

75.1

0.62

65.6

Major PPT

0.83

0.7

82.8

25.8

Minor 5ss

37.1

-1.5

3.3

50.2

46.4

Minor BPS

55.6

0.17

1.7

67.58

39.4

Associated Gene:

Gene:

SPON1

Ensembl Gene ID:

ENSAPLG00000006849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010246

5444213 - 5633863

189651

ENSAPLT00000007124

5451750 - 5633863

182114