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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54811713_54812233_R

Intron Information:

Intron Rank:

150778

Intron Class:

major

Intron Phase:

Intron Coordinates:

54811713 - 54812233

Intron Length:

521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TGTTTTGTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

84.2

33.9

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

77.3

0.61

73.3

40.9

Minor 5ss

39.5

-1.2

3.2

58.6

45.9

Minor BPS

60.6

0.33

75.16

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028622

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031142

54810065 - 54812833

2769