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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54848083_54848118_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

54848083 - 54848118

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCCCCTTTA

5'SS Class:

weak_major

3'SS Sequence:

GTAAACCTTTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCGTAAA

U12 Branch Point Sequence:

TGCCCCTTTACT

Flanking Amino Acid:

LVGEFLQEHNVDDLLAEMQE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.3

0.01

1.4

53.1

43.5

Major BPS

62.6

0.31

1.2

63.9

40.2

Major PPT

57.1

0.16

1.1

57.5

42.9

Minor 5ss

35.8

-1.6

4.1

53.2

44.3

Minor BPS

65.8

0.58

1.7

78.88

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048034

54847951 - 54850799

2849