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Intron Name: Anas_platyrhynchos_platyrhynchos_5_548692_549383_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

548692 - 549383

Intron Length:

692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCACATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

CTTCACTAAACT

Flanking Amino Acid:

APDKLNVVKKTLITFVNKHL

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

1.1

76.6

38.6

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

81.8

0.71

0.8

78.4

34.4

Minor 5ss

31.6

-2.1

2.8

41.6

44.4

Minor BPS

58.2

0.34

1.9

78.43

43.5

Associated Gene:

Gene:

PARVA

Ensembl Gene ID:

ENSAPLG00000016301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017020

542895 - 604188

61294