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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55021963_55024039_F

Intron Information:

Intron Rank:

144264

Intron Class:

major

Intron Phase:

Intron Coordinates:

55021963 - 55024039

Intron Length:

2077

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

ATCTTATTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

TGGATCTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.16

0.7

89.2

23.6

Major BPS

82.6

0.81

0.8

71.7

Major PPT

82.4

0.73

0.8

73.9

40.1

Minor 5ss

25.7

-2.8

3.6

34.4

41.2

Minor BPS

54.4

0.22

1.6

68.8

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041883

55020661 - 55024061

3401