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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55036985_55041579_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

55036985 - 55041579

Intron Length:

4595

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCCTTTCTA

5'SS Class:

weak_major

3'SS Sequence:

CAGTCCATGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

CAGTCCATGACA

Flanking Amino Acid:

GMLKLLGFLAWSSSGLPVLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.1

1.3

52.5

43.9

Major BPS

0.52

1.5

79.6

35.6

Major PPT

60.3

0.23

1.1

54.3

Minor 5ss

29.2

-2.4

3.8

38.5

41.5

Minor BPS

57.5

0.23

1.7

64.24

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032989

55033952 - 55041769

7818