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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55094402_55094500_F

Intron Information:

Intron Rank:

147776

Intron Class:

major

Intron Phase:

Intron Coordinates:

55094402 - 55094500

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

ATGCATGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

75.9

35.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

69.2

0.43

61.2

43.9

Minor 5ss

33.7

-1.9

2.9

Minor BPS

76.9

0.84

1.2

83.98

29.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029522

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023776

55093907 - 55095539

1633