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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55123719_55127235_F

Intron Information:

Intron Rank:

124276

Intron Class:

major

Intron Phase:

Intron Coordinates:

55123719 - 55127235

Intron Length:

3517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGAGCG

5'SS Class:

major

3'SS Sequence:

TTTTATTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCATTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

57.9

39.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.3

0.89

0.7

88.4

28.3

Minor 5ss

-1.5

3.3

44.7

44.2

Minor BPS

58.4

0.34

1.5

71.47

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017004

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022377

55123553 - 55129177

5625