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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55158964_55159461_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55158964 - 55159461

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

ATGTCAATATAT

Flanking Amino Acid:

TRTQIRNEFIGLQLLDILDK

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.8

83.4

27.8

Major BPS

81.9

0.79

0.9

80.1

Major PPT

84.5

0.78

0.8

77.2

37.1

Minor 5ss

33.8

-1.9

2.9

41.4

44.7

Minor BPS

44.6

-0.3

2.1

66.27

43.6

Associated Gene:

Gene:

INF2

Ensembl Gene ID:

ENSAPLG00000015886

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016616

55149226 - 55169282

20057