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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55166435_55167431_F


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
55166435 - 55167431

Intron Length:
997

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACCACTG

5'SS Class:
major

3'SS Sequence:
CTTTCTGCTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CACTTAT

U12 Branch Point Sequence:
TAACACTTATTT

Flanking Amino Acid:
RITLLHHILEEVENSHTDLL

Intron Amino Acid Position:
861

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.5
0.39
1.2
57.5
47.2

Major BPS
71.3
0.53
1
61.3
37

Major PPT
83.2
0.75
0.8
80.9
31.2

Minor 5ss
40
-1.1
3.4
56.6
47.5

Minor BPS
51.2
0.12
1.8
69.04
41.3

Associated Gene:

Gene:
INF2

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

55149226 - 55169282
20057