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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55172164_55172270_R

Intron Information:

Intron Rank:

134497

Intron Class:

major

Intron Phase:

Intron Coordinates:

55172164 - 55172270

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGCCCC

5'SS Class:

major

3'SS Sequence:

CTCCGTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTGAG

U12 Branch Point Sequence:

TCTTCCTCCGTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.1

56.1

41.4

Major BPS

48.4

-0.1

1.5

39.9

Major PPT

80.5

0.69

0.8

71.8

38.1

Minor 5ss

-1

54.1

37.8

Minor BPS

40.4

-0.6

3.6

71.83

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044017

55171855 - 55173938

2084

ENSAPLT00000040507

55171855 - 55178615

6761