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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55272820_55273509_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55272820 - 55273509

Intron Length:

690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTTT

5'SS Class:

strong_major

3'SS Sequence:

CCCCATTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCAAAT

U12 Branch Point Sequence:

TTTTCCCCCATT

Flanking Amino Acid:

QMITITPPDQDDSMDCIDNE

Intron Amino Acid Position:

455

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

81.9

32.1

Major BPS

64.7

0.37

1.1

69.5

34.1

Major PPT

78.7

0.64

0.8

75.4

32.6

Minor 5ss

-0.9

3.5

64.1

47.4

Minor BPS

49.9

0.08

2.3

81.02

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017042

55272740 - 55337060

64321