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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55290446_55291695_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55290446 - 55291695

Intron Length:

1250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTGGACTTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTTCTAATA

Flanking Amino Acid:

EKNVVYRDLKLENLMLDKDG

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.2

38.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.52

69.5

41.3

Minor 5ss

-1.8

2.9

42.9

Minor BPS

66.6

0.52

1.6

79.19

30.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017042

55272740 - 55337060

64321