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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55296556_55299399_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55296556 - 55299399

Intron Length:

2844

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTATGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TATATTTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

CATTGCTTATAT

Flanking Amino Acid:

RTFHVETPEEREEWTKAIQT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

75.3

35.6

Major BPS

0.65

1.1

77.4

37.3

Major PPT

75.5

0.57

69.6

45.5

Minor 5ss

54.7

0.16

2.3

70.5

40.1

Minor BPS

49.3

0.03

2.1

70.25

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017042

55272740 - 55337060

64321