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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55483906_55484706_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

55483906 - 55484706

Intron Length:

801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGAA

5'SS Class:

strong_major

3'SS Sequence:

ACATATCACATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

TGATAAATAACA

Flanking Amino Acid:

INVNDSSSEQGEDILKRFER

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.3

34.5

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

57.5

0.17

0.9

51.1

37.3

Minor 5ss

28.3

-2.5

3.5

37.3

47.4

Minor BPS

48.2

-0.1

65.13

39.9

Associated Gene:

Gene:

PLD4

Ensembl Gene ID:

ENSAPLG00000016446

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017165

55480617 - 55491916

11300