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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55485714_55486077_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55485714 - 55486077

Intron Length:

364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTAGG

5'SS Class:

major

3'SS Sequence:

TTTCTTCTGACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAC

U12 Branch Point Sequence:

TTTCTTCTGACA

Flanking Amino Acid:

NGTLTKAYFSASPPAFCPEG

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

45.2

Major BPS

61.7

0.29

63.7

32.3

Major PPT

82.8

0.74

0.9

80.1

Minor 5ss

-1.3

2.8

52.4

44.2

Minor BPS

55.8

0.18

1.6

72.08

33.2

Associated Gene:

Gene:

PLD4

Ensembl Gene ID:

ENSAPLG00000016446

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017165

55480617 - 55491916

11300