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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55498453_55498977_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

55498453 - 55498977

Intron Length:

525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGCAGAAT

5'SS Class:

weak_major

3'SS Sequence:

CAAAAATTGGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

GTTTCAAAAATT

Flanking Amino Acid:

TESTTELEASRSIGLTSPTR

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.9

0.21

1.1

61.9

38.1

Major BPS

68.1

0.45

73.5

28.6

Major PPT

47.1

-0.1

1.2

41.9

41.6

Minor 5ss

28.5

-2.5

3.4

38.3

41.4

Minor BPS

48.6

-0

2.1

75.08

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000580

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000576

55497041 - 55501681

4641