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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55499689_55501212_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

55499689 - 55501212

Intron Length:

1524

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTA|GCATGCCTA

5'SS Class:

weak_major

3'SS Sequence:

CAAGTTCTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

AACACCTCAAGT

Flanking Amino Acid:

VKAPKIEVDITGTEAPKVDI

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.1

0.15

1.3

53.1

43.7

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

62.9

0.29

1.1

57.3

42.9

Minor 5ss

39.1

-1.2

4.1

57.1

42.8

Minor BPS

49.2

0.02

1.9

64.84

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000580

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000576

55497041 - 55501681

4641