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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55565370_55568708_F

Intron Information:

Intron Rank:

126343

Intron Class:

major

Intron Phase:

Intron Coordinates:

55565370 - 55568708

Intron Length:

3339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACAAAT

U12 Branch Point Sequence:

TCTACTCTAAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

1.2

30.2

Major BPS

51.7

0.04

1.2

59.2

35.9

Major PPT

86.2

0.82

0.7

80.2

31.9

Minor 5ss

43.2

-0.7

2.9

57.4

40.7

Minor BPS

49.2

-0

64.34

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036615

55565054 - 55570856

5803

ENSAPLT00000023487

55558961 - 55571485

12525