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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55568878_55569732_F

Intron Information:

Intron Rank:

126347

Intron Class:

major

Intron Phase:

Intron Coordinates:

55568878 - 55569732

Intron Length:

855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

TTTTCCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAGCAA

U12 Branch Point Sequence:

CCTGCCTTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

72.2

37.5

Major BPS

48.5

-0

1.4

38.9

Major PPT

92.2

0.95

0.6

84.9

29.9

Minor 5ss

39.9

-1.1

2.8

57.3

39.7

Minor BPS

57.4

0.31

1.8

70.75

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036615

55565054 - 55570856

5803