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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55617783_55618150_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

55617783 - 55618150

Intron Length:

368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTCACAGCATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.2

39.5

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

0.59

69.6

41.6

Minor 5ss

29.5

-2.4

3.4

39.1

46.7

Minor BPS

42.6

-0.5

2.2

68.69

41.8

Associated Gene:

Gene:

CLBA1

Ensembl Gene ID:

ENSAPLG00000005947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029851

55617104 - 55626761

9658

ENSAPLT00000017544

55617752 - 55625910

8159