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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55619252_55622516_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55619252 - 55622516

Intron Length:

3265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

ATATATGTAATA

Flanking Amino Acid:

TQDASSSLNEANHSYEDIFK

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

85.2

32.2

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

83.3

0.75

0.8

76.9

37.3

Minor 5ss

37.2

-1.4

3.6

57.3

47.4

Minor BPS

48.3

-0.1

2.1

63.28

37.2

Associated Gene:

Gene:

CLBA1

Ensembl Gene ID:

ENSAPLG00000005947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029851

55617104 - 55626761

9658

ENSAPLT00000027911

55617104 - 55627203

10100

ENSAPLT00000017544

55617752 - 55625910

8159

ENSAPLT00000006158

55615897 - 55627203

11307

ENSAPLT00000033815

55617104 - 55625910

8807