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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55624342_55625604_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55624342 - 55625604

Intron Length:

1263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAATTGAA

5'SS Class:

major

3'SS Sequence:

TTTGCTTTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TTTTGCTTTATT

Flanking Amino Acid:

SVLGIDANQTDSSKSQDDIF

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

70.8

34.9

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

77.9

0.63

0.9

78.5

34.7

Minor 5ss

32.6

-2

3.2

40.9

45.4

Minor BPS

65.1

0.56

2.1

87.87

37.8

Associated Gene:

Gene:

CLBA1

Ensembl Gene ID:

ENSAPLG00000005947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017544

55617752 - 55625910

8159

ENSAPLT00000006158

55615897 - 55627203

11307

ENSAPLT00000033815

55617104 - 55625910

8807

ENSAPLT00000029851

55617104 - 55626761

9658

ENSAPLT00000027911

55617104 - 55627203

10100