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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55625719_55627038_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55625719 - 55627038

Intron Length:

1320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCATTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TATTTTTTCATT

Flanking Amino Acid:

NNCKALIQTKLSVSPDSRHD

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

100

1.24

0.5

100

Major PPT

90.1

0.9

0.7

89.7

25.6

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

62.2

0.46

1.7

36.6

Associated Gene:

Gene:

CLBA1

Ensembl Gene ID:

ENSAPLG00000005947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027911

55617104 - 55627203

10100

ENSAPLT00000006158

55615897 - 55627203

11307