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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55636101_55636151_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

55636101 - 55636151

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTCCTACT

5'SS Class:

weak_major

3'SS Sequence:

TGCCGGTCTAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGAAAAT

U12 Branch Point Sequence:

GTTTCCAGAAAA

Flanking Amino Acid:

VEDISPPTCLLEDDRQDLKG

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.6

0.11

1.3

60.3

Major BPS

48.6

-0

1.2

53.4

38.7

Major PPT

57.4

0.17

1.1

55.1

39.5

Minor 5ss

39.3

-1.2

2.8

50.4

39.9

Minor BPS

55.5

0.17

1.9

72.18

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028581

55635795 - 55636646

852