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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55636265_55636381_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

55636265 - 55636381

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCATTACTC

5'SS Class:

weak_major

3'SS Sequence:

CGGTCTGCAGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

AAGAGTCTAACT

Flanking Amino Acid:

SNQQPVNVCADQIENSLLIV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.3

0.2

1.3

56.5

44.6

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

49.6

-0

1.1

49.6

38.4

Minor 5ss

32.5

-2

4.1

47.7

42.4

Minor BPS

45.1

-0.2

60.96

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028581

55635795 - 55636646

852