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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55659566_55659699_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55659566 - 55659699

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGACAA

5'SS Class:

major

3'SS Sequence:

TTTATTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATTTTAACA

Flanking Amino Acid:

VVPHWPFYNLDTMFVRGLKR

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

62.3

37.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.3

0.77

0.9

81.1

35.2

Minor 5ss

37.5

-1.4

44.2

44.6

Minor BPS

77.6

0.86

1.1

83.48

30.3

Associated Gene:

Gene:

CDCA4

Ensembl Gene ID:

ENSAPLG00000002218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041114

55658398 - 55665964

7567

ENSAPLT00000036407

55658398 - 55665964

7567

ENSAPLT00000002216

55658398 - 55661964

3567