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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55659991_55661695_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55659991 - 55661695

Intron Length:

1705

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCAAAATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTCCAAAATT

Flanking Amino Acid:

MKSVKYLRIHRLIMPVETQE

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

89.9

23.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

62.4

0.28

61.9

37.9

Minor 5ss

48.6

-0.1

2.8

71.8

38.1

Minor BPS

61.4

0.44

1.9

83.35

37.8

Associated Gene:

Gene:

CDCA4

Ensembl Gene ID:

ENSAPLG00000002218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041114

55658398 - 55665964

7567

ENSAPLT00000036407

55658398 - 55665964

7567