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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55659991_55661883_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55659991 - 55661883

Intron Length:

1893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGTAGC

5'SS Class:

major

3'SS Sequence:

TTTCCAAAATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTCCAAAATT

Flanking Amino Acid:

EEGLHQAQLLRLIMPVETQE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

41.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

62.4

0.28

61.9

37.9

Minor 5ss

35.2

-1.7

2.9

42.7

39.2

Minor BPS

61.4

0.44

1.9

83.35

37.8

Associated Gene:

Gene:

CDCA4

Ensembl Gene ID:

ENSAPLG00000002218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002216

55658398 - 55661964

3567