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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55661736_55661883_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

55661736 - 55661883

Intron Length:

148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGTAGC

5'SS Class:

major

3'SS Sequence:

TATTTTAAAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTATTTTAAAA

Flanking Amino Acid:

KRKDYIKHNYWNVTMKSVKY

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

41.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.22

1.2

62.5

41.2

Minor 5ss

35.2

-1.7

2.9

42.7

39.2

Minor BPS

68.2

0.57

1.4

76.88

33.6

Associated Gene:

Gene:

CDCA4

Ensembl Gene ID:

ENSAPLG00000002218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041114

55658398 - 55665964

7567

ENSAPLT00000036407

55658398 - 55665964

7567