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Intron Name: Anas_platyrhynchos_platyrhynchos_5_557522_559499_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

557522 - 559499

Intron Length:

1978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTTGC

5'SS Class:

major

3'SS Sequence:

ATATCTATTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTACTTTTAATA

Flanking Amino Acid:

PPRSIKWNVDSVHAKSLVAI

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

66.5

40.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.2

0.63

0.9

74.9

38.9

Minor 5ss

43.5

-0.7

2.8

62.6

Minor BPS

0.4

1.2

65.91

34.2

Associated Gene:

Gene:

PARVA

Ensembl Gene ID:

ENSAPLG00000016301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017020

542895 - 604188

61294