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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5575409_5577549_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5575409 - 5577549

Intron Length:

2141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

CACTTCTCAATA

Flanking Amino Acid:

GSLTKKICEQDSASEGVTDK

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.9

0.99

0.8

84.8

28.2

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

93.2

0.97

0.6

92.1

18.5

Minor 5ss

40.3

-1.1

3.3

55.3

48.9

Minor BPS

55.2

0.16

1.6

59.88

40.7

Associated Gene:

Gene:

SPON1

Ensembl Gene ID:

ENSAPLG00000006849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010246

5444213 - 5633863

189651

ENSAPLT00000007124

5451750 - 5633863

182114