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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55849715_55850662_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55849715 - 55850662

Intron Length:

948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGGTTT

5'SS Class:

major

3'SS Sequence:

TTCTTTTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

TTCTTTTTTATA

Flanking Amino Acid:

EGWEGRTCTQNTNDCNPHPC

Intron Amino Acid Position:

885

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

73.2

38.6

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

90.6

0.91

0.6

87.5

Minor 5ss

43.9

-0.7

3.4

44.7

Minor BPS

59.5

0.29

1.6

69.68

37.1

Associated Gene:

Gene:

JAG2

Ensembl Gene ID:

ENSAPLG00000004118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027918

55838262 - 55904696

66435

ENSAPLT00000021404

55838262 - 55904696

66435

ENSAPLT00000004372

55838262 - 55904696

66435