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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55851396_55851775_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55851396 - 55851775

Intron Length:

380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTAAACATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTATTTTTAATT

Flanking Amino Acid:

NDWKGKTCHSREYQCDANTC

Intron Amino Acid Position:

808

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

1.2

85.2

32.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

60.2

0.23

52.8

41.6

Minor 5ss

-1.1

3.4

57.4

40.7

Minor BPS

0.99

87.98

30.9

Associated Gene:

Gene:

JAG2

Ensembl Gene ID:

ENSAPLG00000004118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027918

55838262 - 55904696

66435

ENSAPLT00000021404

55838262 - 55904696

66435

ENSAPLT00000004372

55838262 - 55904696

66435