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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55853254_55853757_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55853254 - 55853757

Intron Length:

504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTGTCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATAAT

U12 Branch Point Sequence:

TAATTGTTGACT

Flanking Amino Acid:

RGFTGIYCHENINDCLGKPC

Intron Amino Acid Position:

732

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

69.9

41.1

Major BPS

67.7

0.44

1.1

67.9

34.4

Major PPT

75.6

0.58

0.8

71.4

33.1

Minor 5ss

33.8

-1.8

3.2

40.5

39.9

Minor BPS

56.7

0.29

2.1

76.18

40.5

Associated Gene:

Gene:

JAG2

Ensembl Gene ID:

ENSAPLG00000004118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004372

55838262 - 55904696

66435

ENSAPLT00000027918

55838262 - 55904696

66435

ENSAPLT00000021404

55838262 - 55904696

66435