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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55857099_55857592_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55857099 - 55857592

Intron Length:

494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTTAGTATT

5'SS Class:

major

3'SS Sequence:

ATTTTATCCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTTATTTTATCC

Flanking Amino Acid:

PGWTGVNCHININDCHGQCQ

Intron Amino Acid Position:

553

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

37.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

75.6

0.58

0.8

70.5

34.6

Minor 5ss

40.2

-1.1

2.8

59.1

38.8

Minor BPS

55.7

0.16

1.6

65.97

40.2

Associated Gene:

Gene:

JAG2

Ensembl Gene ID:

ENSAPLG00000004118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021404

55838262 - 55904696

66435

ENSAPLT00000004372

55838262 - 55904696

66435