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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55859041_55861236_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55859041 - 55861236

Intron Length:

2196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAATTCTG

5'SS Class:

major

3'SS Sequence:

CCTCTCTTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAG

U12 Branch Point Sequence:

TATTTAGCAATA

Flanking Amino Acid:

DGYSGKNCEIAEHACVSNPC

Intron Amino Acid Position:

439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

67.3

43.6

Major BPS

64.7

0.37

1.5

63.7

43.9

Major PPT

79.8

0.67

0.7

32.6

Minor 5ss

-1.3

47.3

42.4

Minor BPS

44.2

-0.4

2.3

61.54

38.7

Associated Gene:

Gene:

JAG2

Ensembl Gene ID:

ENSAPLG00000004118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004372

55838262 - 55904696

66435

ENSAPLT00000027918

55838262 - 55904696

66435

ENSAPLT00000021404

55838262 - 55904696

66435