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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55873565_55880112_R

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

55873565 - 55880112

Intron Length:

6548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

AAAATAAAAATAG|G

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAA

Flanking Amino Acid:

AWDWDNDTKGGEDLLIERVA

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

88.7

25.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

-0.1

35.4

38.3

Minor 5ss

36.4

-1.5

48.3

41.8

Minor BPS

76.9

0.84

1.2

83.98

29.3

Associated Gene:

Gene:

JAG2

Ensembl Gene ID:

ENSAPLG00000004118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021404

55838262 - 55904696

66435

ENSAPLT00000004372

55838262 - 55904696

66435

ENSAPLT00000027918

55838262 - 55904696

66435