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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55880168_55903810_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55880168 - 55903810

Intron Length:

23643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGTCGC

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATCTAACT

Flanking Amino Acid:

IVIPFQFAWPRSFTLVLEAW

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

58.4

46.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

33.7

-1.9

3.2

44.5

43.5

Minor BPS

67.1

0.62

1.8

89.85

33.8

Associated Gene:

Gene:

JAG2

Ensembl Gene ID:

ENSAPLG00000004118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004372

55838262 - 55904696

66435

ENSAPLT00000027918

55838262 - 55904696

66435

ENSAPLT00000021404

55838262 - 55904696

66435