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Intron Name: Anas_platyrhynchos_platyrhynchos_5_55904135_55904327_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55904135 - 55904327

Intron Length:

193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGGGG

5'SS Class:

major

3'SS Sequence:

TTTTTATTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CGGTTTTTATTT

Flanking Amino Acid:

LALLLAACLQVSRCTGYFEL

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

60.4

44.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

90.2

0.9

0.6

89.7

25.5

Minor 5ss

34.7

-1.7

3.5

46.4

Minor BPS

50.9

0.11

1.6

63.15

42.3

Associated Gene:

Gene:

JAG2

Ensembl Gene ID:

ENSAPLG00000004118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027918

55838262 - 55904696

66435

ENSAPLT00000021404

55838262 - 55904696

66435

ENSAPLT00000004372

55838262 - 55904696

66435